ComparisonHamlet + Amoxicillin...1	ComparisonHamlet + Amoxicillin...2	ComparisonHamlet + Amoxicillin...3	ComparisonHamlet + Amoxicillin...4	ComparisonHamlet + Amoxicillin...5	ComparisonHamlet + Amoxicillin...6
1	Coefficients	Standard Errors	Test Statistics W	p Values	Adjusted p Values	Differential Abundance
Lachnospiraceae_[G-11] bacterium_MOT-178 (SP1) 	0.61834725099151	1.68537174396582	0.366890719038927	0.713700534580546	1	FALSE
Alistipes sp._MOT-127 (SP10) 	2.35566857263491	1.02536049865582	2.29740523037804	0.0215956636841723	1	FALSE
Turicimonas muris (SP11) 	2.80466910125153	1.45213764209186	1.93140720270242	0.0534327151298514	1	FALSE
Bacteroides acidofaciens (SP19) 	1.0787861307611	1.62312610086018	0.664634824237868	0.506284089822298	1	FALSE
Bacteroides caecimuris (SP2) 	3.08815451975544	1.28042201246663	2.41182554633403	0.0158728743715219	1	FALSE
Blautia caecimuris (SP20) 	3.18252057924841	1.9645834311925	1.61994676770567	0.105243712345173	1	FALSE
Prevotella sp._MOT-128 (SP22) 	-0.503976813422778	1.63020324564247	-0.309149681041248	0.757207668866759	1	FALSE
Roseburia faecis (SP27) 	1.43416451685922	1.15850876533208	1.23794015183659	0.21573825288375	1	FALSE
Flavonifractor plautii (SP28) 	3.25697815435319	1.5097247092656	2.15733248211691	0.0309797678450176	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149 (SP29) 	-0.279768655529284	1.36822987476798	-0.204474891747797	0.837982410977508	1	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-183 (SP3) 	0.232018119285315	1.48514977621785	0.156225400966751	0.87585535547621	1	FALSE
Robinsoniella peoriensis (SP30) 	3.56306990964355	1.56056934373831	2.28318589234126	0	0	TRUE
Eubacteriales_[G-1] bacterium_MOT-158 (SP38) 	-0.497289183080102	1.17380417771984	-0.423656000310126	0	0	TRUE
Bacteroides stercorirosoris (SP4) 	0.360138897007629	1.4059068053059	0.256161287254933	0.797826299803625	1	FALSE
Muribaculum intestinale (SP5) 	3.48321215621961	1.56490730255954	2.22582650775706	0.0260258045426929	1	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-184 (SP6) 	-1.4639308071422	1.36274380707511	-1.07425240132573	0.282709572151427	1	FALSE
Parabacteroides goldsteinii (SP8) 	2.65029446735323	1.10273375389636	2.40338563863559	0.0162440469740394	1	FALSE
Akkermansia muciniphila (SP9) 	-1.33781690020277	1.71604239812957	-0.779594316353107	0.435629702424931	1	FALSE
Anaerotruncus rubiinfantis_nov_92.760% (SPN103) 	1.50092473750139	1.54291290553732	0.972786430209218	0.330659458311199	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.991% (SPN104) 	-3.12345109385197	1.05662286537951	-2.95606994339471	0	0	TRUE
Mediterraneibacter [Ruminococcus] gnavus_nov_93.424% (SPN105) 	1.48456288177486	1.34882693282441	1.10063259091825	0.271056595167475	1	FALSE
Alistipes putredinis_nov_95.887% (SPN106) 	-1.40533686107541	1.17874473864702	-1.19223171480577	0	0	TRUE
Oscillibacter valericigenes_nov_95.260% (SPN107) 	0.462496798610349	1.38412662155215	0.334143416800776	0.738271339146391	1	FALSE
Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.522% (SPN110) 	3.47043252394369	1.49231052552626	2.3255431524346	0.0200429352809587	1	FALSE
Saccharofermentans acetigenes_nov_88.764% (SPN111) 	-0.584593615256477	1.48572915841732	-0.393472532960999	0.69397050691814	1	FALSE
Lacrimispora indolis_nov_90.724% (SPN112) 	0.384604352994377	1.59417274951866	0.241256383983795	0.809356413076386	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.870% (SPN116) 	0.510197208578587	1.31302076874435	0.388567508392492	0.69759610612014	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_93.043% (SPN117) 	1.64176935160887	1.7528607490503	0.936622805033647	0.348952617076803	1	FALSE
Alistipes putredinis_nov_95.879% (SPN119) 	0.322915976602879	1.17425692009106	0.274996017547708	0.783319297938694	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.506% (SPN121) 	-2.40690645453851	0.957130717236537	-2.51471028062689	0.0119130236007029	1	FALSE
Ruthenibacterium lactatiformans_nov_97.045% (SPN122) 	0.763555535171365	1.38250458738753	0.5522987353078	0.580743696945926	1	FALSE
Lachnospiraceae_[G-11] bacterium_MOT-178_nov_97.978% (SPN124) 	1.40278743113687	1.13512687340187	1.23579792180661	0.216533687678721	1	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_96.599% (SPN126) 	-0.420013662823974	1.20540584399199	-0.348441701122832	0	0	TRUE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.022% (SPN127) 	1.63624660365212	1.52902678042872	1.07012292040649	0.28456398343296	1	FALSE
Faecalicatena orotica_nov_95.238% (SPN128) 	-0.596543194534593	1.22790721799597	-0.485821066764467	0	0	TRUE
Enterocloster asparagiformis_nov_94.344% (SPN129) 	1.68381619824925	1.07393708907627	1.56789090848661	0.116906593893476	1	FALSE
Prevotellamassilia timonensis_nov_94.168% (SPN13) 	-0.198793453352179	1.23221927201868	-0.161329608996057	0.871833804092847	1	FALSE
Eisenbergiella massiliensis_nov_96.599% (SPN130) 	-0.275049795153991	1.40038878470418	-0.196409595790995	0.844289586182084	1	FALSE
Neglectibacter timonensis_nov_97.500% (SPN131) 	-1.20732358087223	1.0999629234901	-1.09760388744875	0	0	TRUE
Mailhella massiliensis_nov_92.094% (SPN132) 	0.210680227286343	1.15912731946541	0.181757623816086	0.855772941791284	1	FALSE
Anaerotruncus rubiinfantis_nov_92.517% (SPN133) 	1.66469952217361	1.2829875977262	1.29751801585916	0.194453010402663	1	FALSE
Eubacterium coprostanoligenes_nov_95.701% (SPN137) 	1.60652980060748	1.10236245723096	1.45735169958794	0.145019322553553	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.056% (SPN14) 	-0.590189556373199	1.40168939017881	-0.421055877649121	0.673714279464071	1	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-183_nov_95.425% (SPN140) 	1.33164520361097	1.07442415825506	1.2394036315915	0.2151960572197	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.281% (SPN141) 	0.493673385518438	1.23198767881619	0.400712924331196	0.688631494200711	1	FALSE
Petrocella atlantisensis_nov_87.810% (SPN142) 	0.518040249122643	1.2300764156149	0.421144769988687	0.673649371399635	1	FALSE
Oscillospiraceae_[G-3] bacterium_MOT-150_nov_96.396% (SPN143) 	0.725601338489257	1.17434877515183	0.617875501590609	0.536657409068644	1	FALSE
Lachnospiraceae_[G-6] bacterium_MOT-171_nov_95.238% (SPN144) 	1.81573520168194	1.80628020969155	1.00523451009409	0.31478394145379	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_92.208% (SPN146) 	1.49360752930933	1.408955354493	1.06008151681058	0.289107515732155	1	FALSE
Eubacteriales_[G-2] bacterium_MOT-162_nov_95.260% (SPN147) 	-0.149208819031575	1.02170131416655	-0.146039568475344	0	0	TRUE
Ruminococcus albus_nov_92.500% (SPN149) 	-0.121453029193745	1.03685437594539	-0.117136053057601	0	0	TRUE
Alistipes putredinis_nov_96.529% (SPN150) 	0.152536269260014	0.898029926240532	0.169856554668043	0.865122948889205	1	FALSE
Rhodospirillum rubrum_nov_88.036% (SPN154) 	-1.14638845708839	0.909643446077838	-1.2602613277008	0	0	TRUE
Anaerotignum lactatifermentans_nov_97.523% (SPN157) 	-0.634266221155076	1.27715807131809	-0.496623116119435	0.619454848872279	1	FALSE
Phocea massiliensis_nov_95.682% (SPN158) 	-0.571895894592493	1.3614206680828	-0.420072875342679	0.674432217226402	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_96.171% (SPN159) 	3.27318384344383	1.08505456973635	3.01660758337636	0	0	TRUE
Lachnospiraceae_[G-6] bacterium_MOT-171_nov_96.606% (SPN161) 	0.56756074002247	1.26266349236144	0.449494852314938	0.653074720683192	1	FALSE
Muribaculum intestinale_nov_93.737% (SPN162) 	0.0142194239975668	1.29087137854771	0.0110153685594644	0.991211185231915	1	FALSE
Clostridiales_[F-1][G-1] bacterium_HMT_093_nov_90.337% (SPN163) 	-0.266010494582494	1.12386317184757	-0.236692954485898	0	0	TRUE
Falcatimonas natans_nov_92.955% (SPN164) 	3.1726046573982	1.02678582146178	3.08984073512191	0	0	TRUE
Butyricicoccus pullicaecorum_nov_94.382% (SPN166) 	3.46716049303983	1.02995354137371	3.36632707570041	0	0	TRUE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_96.396% (SPN168) 	1.47502098404426	1.19210903290902	1.23732053304291	0.215968107881061	1	FALSE
Lachnoclostridium [Clostridium] populeti_nov_94.331% (SPN172) 	-0.85882890891751	1.67691832326048	-0.512147131440287	0.608548040839975	1	FALSE
Gracilibacter thermotolerans_nov_88.315% (SPN192) 	2.19912681577985	0.986246811388422	2.22979358755437	0.0257611493080748	1	FALSE
Lachnospiraceae_[G-11] bacterium_MOT-176_nov_97.297% (SPN193) 	0.164259858761066	1.84079736862592	0.0892329930282762	0.928896745309576	1	FALSE
Acetatifactor muris_nov_92.551% (SPN2) 	-0.903189460395611	1.89862681401648	-0.475706681127581	0.634283360454538	1	FALSE
Alistipes sp._MOT-127_nov_91.775% (SPN200) 	2.94700524975854	1.1742203468515	2.5097548834514	0	0	TRUE
Clostridiales_[F-1][G-1] bacterium_HMT_093_nov_86.323% (SPN202) 	-0.0440805609996227	1.06297179288593	-0.0414691728366052	0	0	TRUE
Muribaculum intestinale_nov_92.688% (SPN212) 	1.92316584108599	1.24389784066987	1.54608021511664	0.122085196365543	1	FALSE
Algimonas porphyrae_nov_83.596% (SPN215) 	1.43710982290162	1.09812688087171	1.30869196259072	0.190638715381397	1	FALSE
Duncaniella freteri_nov_90.456% (SPN216) 	1.48671447974008	1.72344670301613	0.862640241289879	0.388335297907079	1	FALSE
Lachnospiraceae_[G-9] bacterium_MOT-174_nov_96.136% (SPN226) 	-0.164736680493101	0.999917131481932	-0.164750333109057	0	0	TRUE
Parabacteroides goldsteinii_nov_93.074% (SPN27) 	1.63316035787425	0.912303563738066	1.79015014605725	0.073429777127957	1	FALSE
Duncaniella freteri_nov_93.103% (SPN49) 	2.68538313550911	2.02066011634107	1.32896329956356	0.183860078298583	1	FALSE
Oscillospiraceae_[G-1] bacterium_MOT-147_nov_95.937% (SPN6) 	1.58732843340629	0.800737074675789	1.98233413139886	0.0474418563851947	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_93.074% (SPN60) 	2.97554017151559	1.43906120033379	2.06769536335592	0.0386686781961783	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_92.441% (SPN63) 	3.3446118916148	1.44594833251602	2.3130922567579	0	0	TRUE
Lacrimispora xylanolytica_nov_97.285% (SPN72) 	-1.63479901488807	1.07280716561374	-1.5238516923522	0.127545763197025	1	FALSE
Hydrogenoanaerobacterium saccharovorans_nov_93.636% (SPN74) 	1.56053812099886	1.35351512839577	1.15295210837315	0.248930042267252	1	FALSE
Culturomica massiliensis_nov_93.709% (SPN78) 	0.0625123241410437	1.23426301897801	0.050647490186334	0.959606419663108	1	FALSE
Kineothrix alysoides_nov_95.928% (SPN79) 	-2.0513389565749	1.83511729360634	-1.11782443755605	0.263641982226305	1	FALSE
Gracilibacter thermotolerans_nov_87.668% (SPN8) 	1.6363967055171	0.877607104675588	1.86461196223109	0.0622358149000411	1	FALSE
Lachnospiraceae_[G-10] bacterium_MOT-175_nov_96.372% (SPN80) 	-1.83609729264315	1.07430613583515	-1.70910062913845	0.087432311078287	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_92.191% (SPN82) 	-0.63933930581891	1.4135632468168	-0.452289140410688	0.651060698195776	1	FALSE
Lachnospiraceae_[G-10] bacterium_MOT-175_nov_92.174% (SPN83) 	2.21171999701324	1.44447915379683	1.5311539742195	0.12573134286462	1	FALSE
Lachnoclostridium pacaense_nov_96.825% (SPN84) 	1.28954639814439	1.53732736150603	0.838823552116512	0.401568332165317	1	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.462% (SPN85) 	-1.59744751033223	1.46247801643031	-1.09228822066766	0	0	TRUE
Eubacterium coprostanoligenes_nov_95.485% (SPN86) 	-1.54985892818264	1.4319164159708	-1.08236689718504	0	0	TRUE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.974% (SPN87) 	-3.59633359989618	0.915287427542728	-3.92918496602893	0	0	TRUE
Lachnospiraceae_[G-12] bacterium_MOT-179_nov_92.534% (SPN88) 	1.20721676283993	1.74743142147494	0.690852154770664	0.489658456057195	1	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-184_nov_94.989% (SPN89) 	0.254935853297307	1.21761641919982	0.209372877432814	0.834157164210446	1	FALSE
Pseudoflavonifractor capillosus_nov_95.721% (SPN90) 	0.664942130782976	1.56628699193514	0.424534031251478	0.671176392005898	1	FALSE
Anaerotignum lactatifermentans_nov_95.270% (SPN91) 	0.911482218292774	1.51579982855313	0.601320966741898	0.547626227304657	1	FALSE
Alistipes timonensis_nov_97.831% (SPN94) 	0.499268106820265	1.27742997733207	0.390837944685621	0.695917025539306	1	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.946% (SPN95) 	-3.06677886994016	0.972170679733802	-3.15456836322188	0.00160735715621039	0.173594572870722	FALSE
Oscillospiraceae_[G-4] bacterium_MOT-151_nov_91.723% (SPN98) 	0.444473091888898	1.37589564190987	0.323042735473693	0.746662877420142	1	FALSE
Bacteroides acidifaciens_acidofaciens (SPP3) 	-1.3919716819052	1.44675654252927	-0.96213263322916	0.335982983558484	1	FALSE
Lachnospiraceae_[G-12] bacterium_MOT-179_bacterium_MOT-180 (SPP4) 	-0.486557393464353	1.1723000653927	-0.415045096241092	0	0	TRUE
multigenus multispecies_sppn10_2_nov_95.918% (SPPN10) 	1.42912060757666	1.181110074865	1.20998087984306	0.226286229765361	1	FALSE
Alistipes multispecies_sppn12_2_nov_96.304% (SPPN12) 	2.53453409932482	1.72025694335951	1.47334623999546	0.140657698340571	1	FALSE
multigenus multispecies_sppn14_2_nov_82.889% (SPPN14) 	1.70099972459761	1.29351751715931	1.3150187005841	0.188503617647334	1	FALSE
Eubacteriales_[G-1] multispecies_sppn15_2_nov_97.511% (SPPN15) 	-0.21253802711786	1.32622815942197	-0.160257513466231	0.872678225584253	1	FALSE
multigenus multispecies_sppn17_2_nov_95.928% (SPPN17) 	1.5604850197455	1.10267443704137	1.41518200415754	0.157015139475411	1	FALSE
Bacteroidetes_[G-3] multispecies_sppn2_2_nov_87.554% (SPPN2) 	0.264840866678087	1.36307269525332	0.194296949532004	0.845943374044039	1	FALSE
multigenus multispecies_sppn22_2_nov_95.465% (SPPN22) 	-0.259902092979357	1.10149145774093	-0.235954705915193	0	0	TRUE
Lachnospiraceae_[G-11] multispecies_sppn4_2_nov_96.847% (SPPN4) 	1.67070412897653	1.68488267754251	0.991584845191325	0.321400084988162	1	FALSE
multigenus multispecies_sppn5_2_nov_97.279% (SPPN5) 	2.79681313250233	1.37377467896421	2.03586015620193	0.0417643997452893	1	FALSE
Bacteroides multispecies_sppn6_2_nov_96.312% (SPPN6) 	2.51518836506135	1.1687945943263	2.15195071680762	0.0314012361402838	1	FALSE
multigenus multispecies_sppn7_2_nov_92.777% (SPPN7) 	0.337442153996643	1.75666654781438	0.192092320774529	0.847669890034595	1	FALSE
multigenus multispecies_sppn9_2_nov_93.002% (SPPN9) 	1.20281383373187	1.45212808011994	0.828311118143603	0.407494327936447	1	FALSE
